Pathway Extractor
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New Query
Target phenotype
Disease context
Inputs
GluNR
Comma-separated gene names (slope=1, intercept=0), or full JSON: {"gene": {"slope": n, "intercept": n}, ...}
Builder
pathway_agent (default, free-form)
bfs
sciencekg
simple_agent
editor_agent
Title (optional)
Builder config (max depth, extra targets, models, prompts…)
Form
JSON
Only settings you change from the selected builder's default are sent. JSON is the source of truth; the Form mirrors it. Resets when you change builder.
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incl. logs
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Diff options
Sources:
Node match:
llm
heuristic
Model:
Fold subpaths (Phase B)
Disallow granularity differences
Prune non-causal edges (located_in / part_of)
Max fold hops:
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